Visualizes time-series data from a WRIC CSV file, highlighting protocol changes and optionally saving the plot.

Usage

visualize_with_protocol(
  csv_file,
  plot = "RER",
  protocol_colors_labels = NULL,
  save_png = FALSE,
  path_to_save = NULL
)

csv_file: Path to the CSV file containing time-series data.
plot: A string specifying the column to plot. Defaults to "RER". This can be any valid column name in the CSV file.
protocol_colors_labels: A data frame containing the protocol codes, colors, and labels. If NULL, defaults to a predefined set of protocols.
save_png: Logical, whether to save the plot as a PNG file. Defaults to FALSE.
path_to_save: Directory path for saving the PNG file. If NULL, saves in the current working directory.

A ggplot2 object visualizing the specified data with protocol highlights. Optionally saves the plot to a file if save_png is TRUE.

csv <- system.file("extdata", "example.csv", package = "wrictools")
visualize_with_protocol(csv, plot = "VO2")